Neuroscience
Introduction to Neuroscience, Computational Neuroscience course & xcorr notebooks are great.
The way our brains take input from different senses (eyes, touch) and then decide how to act on the signals is pretty wild. You can trick the brain easily too this way.
Love Alain Chedotal's research.
Notes
- Tools are interpreted by the brain as an extension of the human body.
- Nerve innervations (sensitivity) is physiological while pleasure is neurological/psychological. The brain does a lot of processing of signals before it can become pleasure. Pleasure is most commonly agreed to be a function of dopaminergic receptor activating in the amygdala. What makes it even harder to quantify is that those receptors are subject to acclimatization and as an example for how strong it can be is that it's one of the theorized pathways for addiction to work.
Links
- Master/Mind
- How the Brain Is Computing the Mind
- HTM Forum - Centers around the machine intelligence concept of Hierarchical Temporal Memory (HTM).
- Towards the neural population doctrine
- The Brain That Changes Itself book
- Brain Map - Accelerating progress toward understanding the brain.
- Could a neuroscientist understand a microprocessor? (2017) (Paper) (Tweet)
- Leonardo Da Vinci and the Brain
- Fundamentals of Neuroscience course by Harvard
- Synapses, Neurons and Brains course
- Computational Neuroscience course
- Neuroscience: Exploring the Brain
- Where can I study neuroscience on my own? (2020)
- Dopamine and temporal difference learning: A fruitful relationship between neuroscience and AI (2020)
- NeuroCyto Lab - Want to understand how neurons are organized at the cellular level.
- Hidden Computational Power Found in the Arms of Neurons
- An algorithm that learns through rewards may show how our brain does too (2020) (HN)
- An Existential Crisis in Neuroscience (2020) - We’re mapping the brain in amazing detail—but our brain can’t understand the picture. (HN)
- Computational neuroscience resources
- Neural Reckoning Group - Aim to understand the brain, and intelligent behaviour more widely, via theoretical and computational models.
- Neurolib - Computational neuroscience library for easy whole-brain modeling.
- What are some good books for someone getting into neuroscience? (2020)
- Warden Lab - Investigates the neural circuits that underlie the regulation of behavior by cognition and emotion.
- “You want to know something about how bullshit insane our brains are?” (2018) (HN)
- Human Factory Lab - World-class expertise in human brains. Building tech that interacts with human brains.
- Wu Tsai Neurosciences Institute
- NeuroAILab - Stanford Neuroscience and Artificial Intelligence Laboratory.
- Synaptic specificity is collectively determined by partner identity, location and activity (2019)
- Neurons that fire together, wire together, but how? (HN)
- Super Resolution and 3-D Imaging | Harald Hess (2019) (Tweet)
- A Connectome of the Adult Drosophila Central Brain (2020)
- NanoNeuro 2020 Webinar
- Large Associative Memory Problem in Neurobiology and Machine Learning (2020) (Reddit)
- NeuroAI at CSHL
- Artificial neural networks for neuroscientists: A primer (2020)
- Real-time tracking of serotonin, dopamine opens new window to the brain (2020) (HN)
- Memory involves the whole body. It’s how the self defies amnesia
- Scientists Discovered a Mysterious Organ Lurking in the Centre of the Head (2020) (HN)
- Cell Press: Neuron - Biweekly peer-reviewed scientific journal. Covers neuroscience and related biological processes.
- Neuromatch - Conference made for the whole neuroscience community.
- Cortical Circuitry book (2017) - Provides a readable account of how the neocortex works.
- Deep Neural Networks Help to Explain Living Brains (2020)
- It takes two neurons to ride a bicycle – Matthew Cook
- Tracking the temporal dynamics of cultural perceptual diversity in visual information processing (2014)
- Is neuroscience the key to protecting AI from adversarial attacks? (2020)
- What is a current debate in neuroscience? (2021)
- NeuroSummerSchools - List of summer (and seasonnal) summer schools in neuroscience and related fields.
- Ion channels explained (2021)
- A compact spatial map in V2 visual cortex (2021) (Reddit)
- Artificial Neural Nets Finally Yield Clues to How Brains Learn (2021)
- Lena (2021) (HN)
- That Is Not How Your Brain Works (2021) (HN)
- Awesome Neuroscience
- Greg Dunn Neuro Art
- How brain cells are trying to connect with each other
- The enteric nervous system in gastrointestinal disease etiology (2021)
- Recent books about the behavioral neuroscience of mental disorders and psychopharmacology (2021)
- Neurons might contain something within them (2021) (HN)
- The brain ‘rotates’ memories to save them from new sensations (2021) (HN)
- Anatomy of hierarchy: Feedforward and feedback pathways in macaque visual cortex (Tweet)
- The human brain builds structures in 11 dimensions (2017)
- Neurons Act Not As Complex, Multi-Unit Processing Systems (2020) (Tweet)
- An Atlas of Cortical Arealization Identifies Dynamic Molecular Signatures (2021)
- Nowakowski Lab
- Patrick J. Mineault's research on neuroscience, ML (Code)
- A Browsable Petascale Reconstruction of the Human Cortex (2021)
- Toolmakers aim to untangle fundamental challenges in neuroscience (2021)
- Network Neuroscience
- Neurons Unexpectedly Encode Information in the Timing of Their Firing (2021) (HN)
- The Human Brain in Numbers: A Linearly Scaled-Up Primate Brain (2009) (HN)
- NeuralEnsemble - Community-based initiative to promote and co-ordinate open-source software development in neuroscience. (Code)
- Fast, Efficient Neural Networks Copy Dragonfly Brains (2021)
- How Computationally Complex Is a Single Neuron? (2021) (HN)
- Large-scale neural recordings with single-cell resolution in human cortex using high-density Neuropixels probes (2021) (Tweet)
- Neuroscientists roll out first comprehensive atlas of brain cells (2021) (HN)
- Please stop calling dopamine an addictive rewarding neurochemical (2017) (HN)
- Операции на мозге и звонки с того света. Откровения нейрохирурга (2021)
- Visual percepts evoked with an Intracortical 96-channel microelectrode array inserted in human occipital cortex (2021) (Tweet)
- Neurolight: A Deep Learning Neural Interface for Cortical Visual Prostheses (2020) (Tweet)
- Why are our brains shrinking? (2018) (HN)
- Virtual 3D Fly Brain (HN)
- Generalized Shape Metrics on Neural Representations (2021) (Tweet)
- The strange path of accepting how your brain works (2021) (HN)
- Standardized Brain Molecular Atlas for Systems Modeling and Simulation (2021)
- Study finds a difference between neurons of humans and other mammals (2021) (HN)
- Do mirror neurons explain understanding, or is it the other way round? (2013)
- To Be Energy-Efficient, Brains Predict Their Perceptions (2021)
- Extent of myosin penetration within the actin cortex regulates cell surface mechanics (2021) (Tweet)
- Mapping the Human Brain (2021)
- Neurokernel - Python framework for developing models of the fruit fly brain and executing them on multiple NVIDIA GPUs. (Code)
- On Path Integration of Grid Cells: Group Representation and Isotropic Scaling (2021) (Code)
- MIT: The Human Brain (2019)
- In Search of Oscillatory Traces of the Internal Clock (2016)
- Dr. David Berson: Your Brain's Logic & Function (2021)
- 2021 in review: unsupervised brain models
- Some neurons are active when adding, others when subtracting (HN)
- A global timing mechanism regulates cell-type-specific wiring programmes (2022) (Tweet)
- A Thousand Brains - book review & summary (2021)
- Brains and algorithms partially converge in natural language processing (2022)
- New Brain Maps Can Predict Behaviors (2021)
- Big neuro ideas - Ongoing journal club for the study of big ideas in neuroscience.
- Neuromatch Academy: Computational Neuroscience (Code)
- NeuroDataScience ORIGAMI Research Group (GitHub)
- The Neuro - McGill University (Twitter)
- Nilearn - Machine learning for NeuroImaging in Python.
- tedana - TE-dependent analysis of multi-echo fMRI.
- Neuro-Nav - Set of neuroscience inspired navigation and decision making tasks.
- Relating Transformers to Modes and Neural Representations of the Hippocampal (2022)
- How to learn Computational Neuroscience on your Own (a self-study guide) (2022)
- brainrender - Python based software for visualization of neuroanatomical and morphological data.
- BrainGlobe - Open python tools for morphological analyses in systems neuroscience. (GitHub) (Twitter)
- Cellfinder - Whole-brain cell detection, registration and analysis.
- BG-atlasAPI - Lightweight python module to interact with atlases for systems neuroscience.
- brainreg - Automated 3D brain registration with support for multiple species and atlases.
- Morphapi - Lightweight python package for downloading neurons morphological reconstructions from publicly available datasets.
- cellfinder-napari - Efficient cell detection in large images (e.g. whole mouse brain images).
- brainreg-segment - Segmentation of 3D shapes in a common anatomical space.
- You can trick your brain into thinking an object is your real hand and experience pain response
- NiChord - Python package for visualizing functional connectivity data.
- The Brain Has a ‘Low-Power Mode’ That Blunts Our Senses (2022) (HN)
- Does one simple rule underlie learning in the brain? (2022) (HN)
- NeuroKit2 - Python Toolbox for Neurophysiological Signal Processing.
- Ten Percent of the Brain Myth (HN)
- MNE-Python - Python package for exploring, visualizing, and analyzing human neurophysiological data such as MEG, EEG, sEEG, ECoG, and more. (Web)
- MNELAB - Graphical user interface (GUI) for MNE-Python, a Python package for EEG/MEG analysis.
- Intro to Neuroscience (2017)
- Lena (2021)
- Neuroscience | eLife
- PyPhi - Toolbox for integrated information theory.
- Is it possible to “cure” Aphantasia?
- AngoraPy - Anthropomorphic Goal-Oriented Robotic Control for Neuroscientific Modeling.
- Symmetry and Geometry in Neural Representations
- NeurReps Workshop - Symmetry and Geometry in Neural Representations. (Twitter)
- Cause Area: Differential Neurotechnology Development (2022)
- recut - Large-scale medical image processing and reconstruction toolbox.
- Neuroscience Department - Institut Pasteur (Twitter)
- What is 'brain fog' (2022)
- OpenNeuro - Free and open platform for validating and sharing BIDS-compliant MRI, PET, MEG, EEG, and iEEG data.
- Beacon Biosignals (GitHub)
- Semantic reconstruction of continuous language from non-invasive brain recording (2022) (HN)
- How to build a cognitive map (2022)
- Mind Reader: Reconstructing complex images from brain activities (2022) (Code)
- A New Doorway to the Brain (2022)
- Deep language algorithms predict semantic comprehension from brain activity (2022) (HN)
- Neurons in a dish learn to play Pong (2022) (HN)
- Nengo - Python library for creating and simulating large-scale brain models.
- Building Transformers from Neurons and Astrocytes (2022)
- Book Review: Rhythms of the Brain (2022) (HN)
- The Gut Microbiome Helps Social Skills Develop in the Brain (2022) (HN)
- Speed of learning depends on turning (2022)
- What was the most impactful Neuroscience article, discovery, or content of the year? (2022)
- Longitudinal analysis reveals high prevalence of Epstein-Barr virus associated with multiple sclerosis (2022)
- Body and mind: how somatic feedback signals shape brain activity and cognition (2022)
- FreeSurfer - Fast and accurate deep-learning based neuroimaging pipeline.
- Deep MI Lab (GitHub)
- RatInABox - Python package for modelling locomotion in complex environments and spatially/velocity selective cell activity.
- Introduction to Neuroscience (2023)
- improv - Adaptive Platform for Neuroscience Experiments.
- Why the brain’s connections to the body are crisscrossed (2023) (HN)
- SpikeResources - Collection of tools & resources related to 'spikes' in neuroscience (action potentials recorded from individual neurons).
- Two neurons sensing each other. And trying to connect
- Growing Rat Neurons to Play Video Games (2023) (HN)
- Neuroscience Landscape
- Learning produces a hippocampal cognitive map in the form of a state machine (2023) (HN)
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